Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: Ect2 ENSRNOG00000024365

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Description

epithelial cell transforming 2 [Source:RGD Symbol;Acc:1308524]

Gene Synonyms

LOC361921

Location

Primary_assembly 2: 111,904,522-111,966,626 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 2 transcripts (splice variants), 221 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018055.10	Ect2-201	4052	913aa	ENSRNOP00000018055.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZUD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000092855.3	Ect2-202	3959	882aa	ENSRNOP00000096182.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQ76	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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