Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Sox12 ENSRNOG00000023935

.

Description

SRY-box transcription factor 12 [Source:RGD Symbol;Acc:1586313]

Gene Synonyms

LOC689988

Location

Primary_assembly 3: 161,298,764-161,326,428 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 2 transcripts (splice variants), 258 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000160791.1	Sox12-202	8471	314aa	ENSRNOP00000109579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000032881.8	Sox12-201	6408	314aa	ENSRNOP00000038167.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMU2 A6KHN2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.