Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Egfem1 ENSRNOG00000023908

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Description

EGF-like and EMI domain containing 1 [Source:RGD Symbol;Acc:1307225]

Gene Synonyms

LOC310269, RGD1307225

Location

Primary_assembly 2: 115,607,664-116,252,866 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 9 transcripts (splice variants), 65 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097570.2	Egfem1-203	2177	662aa	ENSRNOP00000081164.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000160311.1	Egfem1-209	3159	652aa	ENSRNOP00000111136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000144250.1	Egfem1-207	2787	603aa	ENSRNOP00000110041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000142746.1	Egfem1-206	2721	656aa	ENSRNOP00000108504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000142244.1	Egfem1-205	2655	617aa	ENSRNOP00000109213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000132495.1	Egfem1-204	2382	629aa	ENSRNOP00000110293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000039603.7	Egfem1-201	2195	648aa	ENSRNOP00000034595.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LWU8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000093839.2	Egfem1-202	2156	610aa	ENSRNOP00000078154.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y2H5	-
ENSRNOT00000153767.1	Egfem1-208	1958	583aa	ENSRNOP00000099568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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