Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Proca1 ENSRNOG00000023381

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Description

protein interacting with cyclin A1 [Source:RGD Symbol;Acc:1561727]

Gene Synonyms

LOC497959, MGC116192

Location

Primary_assembly 10: 63,588,028-63,601,095 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 311 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000037048.6	Proca1-201	1428	311aa	ENSRNOP00000031483.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V7B4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000166228.1	Proca1-204	1958	263aa	ENSRNOP00000104168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000095582.2	Proca1-202	1395	284aa	ENSRNOP00000093454.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIT3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000099360.2	Proca1-203	1380	75aa	ENSRNOP00000088105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9A4	-

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Summary

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