Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tspan1 ENSRNOG00000023320

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Description

tetraspanin 1 [Source:RGD Symbol;Acc:1303308]

Gene Synonyms

MGC93753

Location

Primary_assembly 5: 134,883,706-134,888,730 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues, 31 paralogues and is associated with 23 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018766.6	Tspan1-201	1231	241aa	ENSRNOP00000018766.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JZ68 Q6AYR9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000078736.3	Tspan1-202	714	237aa	ENSRNOP00000072392.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R5U0	-

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Summary

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