Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Col11a1 ENSRNOG00000023148

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Description

collagen type XI alpha 1 chain [Source:RGD Symbol;Acc:2372]

Location

Primary_assembly 2: 201,820,715-202,013,853 forward strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 1 transcript (splice variant), 295 orthologues, 37 paralogues and is associated with 24 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000068413.4	Col11a1-201	7673	1804aa	ENSRNOP00000061595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P20909-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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