Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
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Gene: Ccdc163 ENSRNOG00000022953

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Description

coiled-coil domain containing 163 [Source:RGD Symbol;Acc:1564486]

Gene Synonyms

LOC298442, MGC114580

Location

Primary_assembly 5: 135,409,003-135,415,577 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 4 transcripts (splice variants) and 44 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000056967.3	Ccdc163-201	1772	347aa	ENSRNOP00000053802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4KLX9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000119408.2	Ccdc163-204	1692	326aa	ENSRNOP00000093606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJX6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000107642.2	Ccdc163-203	1535	313aa	ENSRNOP00000078539.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZL67	-
ENSRNOT00000094697.2	Ccdc163-202	1534	248aa	ENSRNOP00000092447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADY7	-

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Summary

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