Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pphln1 ENSRNOG00000022778

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Description

periphilin 1 [Source:RGD Symbol;Acc:1306207]

Gene Synonyms

LOC366975

Location

Primary_assembly 7: 124,538,627-124,629,985 forward strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 5 transcripts (splice variants), 312 orthologues, 2 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000055688.3	Pphln1-201	4067	410aa	ENSRNOP00000052548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A9M4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000102144.1	Pphln1-204	4010	391aa	ENSRNOP00000097952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B6J6	-
ENSRNOT00000115812.1	Pphln1-205	3863	342aa	ENSRNOP00000087420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7X8	-
ENSRNOT00000098702.1	Pphln1-203	3671	312aa	ENSRNOP00000087331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A300	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000090908.2	Pphln1-202	1419	406aa	ENSRNOP00000072231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2G1	-

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Summary

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