Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ilf3 ENSRNOG00000022741

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Description

interleukin enhancer binding factor 3 [Source:RGD Symbol;Acc:619734]

Location

Primary_assembly 8: 19,922,460-19,960,350 forward strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 4 transcripts (splice variants), 210 orthologues, 14 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000079230.2	Ilf3-202	3386	902aa	ENSRNOP00000072369.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000101953.1	Ilf3-204	3662	703aa	ENSRNOP00000086301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0Y6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000009354.7	Ilf3-201	3548	716aa	ENSRNOP00000009354.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LRU1	-
ENSRNOT00000085320.2	Ilf3-203	3125	897aa	ENSRNOP00000073179.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K4U6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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