Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Iqcf3 ENSRNOG00000022445

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Description

IQ motif containing F3 [Source:RGD Symbol;Acc:1565277]

Location

Primary_assembly 8: 107,163,126-107,197,988 reverse strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 4 transcripts (splice variants), 79 orthologues, 4 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000039696.6	Iqcf3-201	1152	220aa	ENSRNOP00000029311.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXX0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000094387.1	Iqcf3-203	1095	201aa	ENSRNOP00000085751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A261	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000102922.1	Iqcf3-204	913	171aa	ENSRNOP00000083886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G9L0	-
ENSRNOT00000081138.2	Iqcf3-202	654	217aa	ENSRNOP00000074152.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7C8	-

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Summary

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