Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Zc2hc1a ENSRNOG00000022356

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Description

zinc finger, C2HC-type containing 1A [Source:RGD Symbol;Acc:1311970]

Gene Synonyms

Fam164a, LOC310244, RGD1311970

Location

Primary_assembly 2: 96,194,671-96,232,288 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 5 transcripts (splice variants), 203 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000095126.2	Zc2hc1a-203	3184	386aa	ENSRNOP00000095781.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AU51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000109624.2	Zc2hc1a-204	2950	363aa	ENSRNOP00000084225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GA23	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000110271.2	Zc2hc1a-205	2915	348aa	ENSRNOP00000079421.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMS7	-
ENSRNOT00000066966.4	Zc2hc1a-201	2873	320aa	ENSRNOP00000060953.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F208	-
ENSRNOT00000090866.3	Zc2hc1a-202	939	288aa	ENSRNOP00000074099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K782	-

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Summary

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