Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: Zc2hc1a ENSRNOG00000022356

Description

zinc finger, C2HC-type containing 1A [Source:RGD Symbol;Acc:1311970]

Gene Synonyms

Fam164a, LOC310244, RGD1311970

Location

Primary_assembly 2: 94,287,354-94,324,882 reverse strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 6 transcripts (splice variants), 197 orthologues, 3 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000109624.1	Zc2hc1a-205	2916	363aa	ENSRNOP00000084225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GA23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000098838.1	Zc2hc1a-204	3144	331aa	ENSRNOP00000078272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKK1	-
ENSRNOT00000095126.1	Zc2hc1a-203	2826	331aa	ENSRNOP00000095781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AU51	-
ENSRNOT00000066966.3	Zc2hc1a-201	2797	322aa	ENSRNOP00000060953.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F208	-
ENSRNOT00000110271.1	Zc2hc1a-206	2791	320aa	ENSRNOP00000079421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMS7	-
ENSRNOT00000090866.2	Zc2hc1a-202	939	288aa	ENSRNOP00000074099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K782	-

Gene: Zc2hc1a ENSRNOG00000022356

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Gene: Zc2hc1a ENSRNOG00000022356

Summary

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