Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: Sdad1 ENSRNOG00000022229

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Description

SDA1 domain containing 1 [Source:RGD Symbol;Acc:1359112]

Gene Synonyms

MGC94390

Location

Primary_assembly 14: 16,025,727-16,055,359 forward strand.

GRCr8:CM070404.1

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000030222.6	Sdad1-201	2222	696aa	ENSRNOP00000035588.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QIL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000119066.2	Sdad1-202	5098	686aa	ENSRNOP00000093210.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AI82 Q5XIQ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000120318.2	Sdad1-203	2158	625aa	ENSRNOP00000086108.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4P0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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