Gene: Pbx3 ENSRNOG00000022162

Description

PBX homeobox 3 [Source:RGD Symbol;Acc:1307198]

Gene Synonyms

LOC102551296, LOC311876

Location

GRCr8:CM070393.1

About this gene

This gene has 2 transcripts (splice variants), 103 orthologues, 12 paralogues and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096937.2	Pbx3-202	2318	434aa	ENSRNOP00000087541.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGR6 A6JUC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000082036.3	Pbx3-201	1144	351aa	ENSRNOP00000075035.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K9K8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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