Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ccdc38 ENSRNOG00000021892

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Description

coiled-coil domain containing 38 [Source:RGD Symbol;Acc:1564046]

Gene Synonyms

LOC500823, RGD1564046

Location

Primary_assembly 7: 29,946,783-30,017,504 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 6 transcripts (splice variants), 109 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000030985.9	Ccdc38-201	2781	648aa	ENSRNOP00000031846.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LUB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000129282.1	Ccdc38-203	2817	631aa	ENSRNOP00000109436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000173930.1	Ccdc38-206	2766	614aa	ENSRNOP00000106576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000170143.1	Ccdc38-205	2730	631aa	ENSRNOP00000102560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000169726.1	Ccdc38-204	2730	631aa	ENSRNOP00000100941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000102276.2	Ccdc38-202	2213	523aa	ENSRNOP00000097231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AR80	-

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Summary

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