Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Lig3 ENSRNOG00000021815

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Description

DNA ligase 3 [Source:RGD Symbol;Acc:1309875]

Gene Synonyms

LOC303369

Location

Primary_assembly 10: 68,215,407-68,238,704 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 207 orthologues, 2 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000076739.4	Lig3-202	5646	976aa	ENSRNOP00000068489.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKE9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000055982.6	Lig3-201	3887	956aa	ENSRNOP00000052836.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HHE2 F7FP17	-
ENSRNOT00000084076.3	Lig3-203	3278	902aa	ENSRNOP00000069379.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JV76	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000168574.1	Lig3-204	1766	431aa	ENSRNOP00000105863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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