Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Scx ENSRNOG00000021812

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Description

scleraxis bHLH transcription factor [Source:RGD Symbol;Acc:1588254]

Gene Synonyms

LOC680712, MGC189419

Location

Primary_assembly 7: 110,054,601-110,061,438 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 2 transcripts (splice variants), 218 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000133284.1	Scx-202	6202	228aa	ENSRNOP00000102837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DFF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000029768.4	Scx-201	2356	228aa	ENSRNOP00000029792.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DFF0 G3V8X3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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