Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tpd52l1 ENSRNOG00000021478

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Description

TPD52 like 1 [Source:RGD Symbol;Acc:1594796]

Gene Synonyms

LOC689256

Location

Primary_assembly 1: 27,991,131-28,110,158 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 6 transcripts (splice variants), 200 orthologues, 3 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107523.2	Tpd52l1-205	1322	209aa	ENSRNOP00000082009.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q499Q2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000096217.2	Tpd52l1-204	1539	144aa	ENSRNOP00000076601.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XV74	-
ENSRNOT00000094990.2	Tpd52l1-203	1330	168aa	ENSRNOP00000087430.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5U0	-
ENSRNOT00000030327.5	Tpd52l1-201	1307	204aa	ENSRNOP00000035722.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FE56	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000116457.2	Tpd52l1-206	1193	191aa	ENSRNOP00000090569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAC3 A6JUR6	-
ENSRNOT00000078841.3	Tpd52l1-202	743	131aa	ENSRNOP00000074667.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8M7 A6JUR7	-

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Summary

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