Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tpd52l1 ENSRNOG00000021478

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Description

TPD52 like 1 [Source:RGD Symbol;Acc:1594796]

Gene Synonyms

LOC689256

Location

Primary_assembly 1: 26,172,170-26,291,109 forward strand.

mRatBN7.2:CM026974.1

About this gene

This gene has 7 transcripts (splice variants), 199 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000030327.4	Tpd52l1-201	1629	209aa	ENSRNOP00000035722.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FE56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000107523.1	Tpd52l1-205	1631	163aa	ENSRNOP00000082009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q499Q2	-
ENSRNOT00000116457.1	Tpd52l1-207	1575	191aa	ENSRNOP00000090569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAC3	-
ENSRNOT00000096217.1	Tpd52l1-204	1514	131aa	ENSRNOP00000076601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XV74	-
ENSRNOT00000094990.1	Tpd52l1-203	690	156aa	ENSRNOP00000087430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5U0	-
ENSRNOT00000078841.2	Tpd52l1-202	538	144aa	ENSRNOP00000074667.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8M7	-
ENSRNOT00000114799.1	Tpd52l1-206	465	154aa	ENSRNOP00000093458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJ07	-

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Summary

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