Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Chgb ENSRNOG00000021269

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Description

chromogranin B [Source:RGD Symbol;Acc:2339]

Gene Synonyms

MGC156676, cgB, sgI

Location

Primary_assembly 3: 140,495,951-140,510,054 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 122 orthologues, 1 paralogue and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000106886.2	Chgb-203	2763	817aa	ENSRNOP00000097178.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AW29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000148554.1	Chgb-204	2794	682aa	ENSRNOP00000104738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HQH2	-
ENSRNOT00000028892.6	Chgb-201	2523	693aa	ENSRNOP00000028892.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QFU5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000094256.2	Chgb-202	2153	614aa	ENSRNOP00000087656.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6A1	-

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Summary

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