Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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Gene expression
Pathway
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Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ecm1 ENSRNOG00000021166

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Description

extracellular matrix protein 1 [Source:RGD Symbol;Acc:620357]

Location

Primary_assembly 2: 183,287,322-183,292,671 reverse strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 2 transcripts (splice variants), 209 orthologues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028740.6	Ecm1-201	2067	561aa	ENSRNOP00000028740.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QGP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000105287.1	Ecm1-202	1736	547aa	ENSRNOP00000085798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A022	-

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Summary

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