Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Sema6c ENSRNOG00000021101

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Description

semaphorin 6C [Source:RGD Symbol;Acc:3659]

Gene Synonyms

Sema Y

Location

Primary_assembly 2: 185,422,639-185,448,689 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 268 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000050914.5	Sema6c-202	3998	960aa	ENSRNOP00000050221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9WTL3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000028645.7	Sema6c-201	3827	928aa	ENSRNOP00000028645.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9WTL3-2	-
ENSRNOT00000090729.3	Sema6c-203	3173	920aa	ENSRNOP00000071511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2W3 A6K2W4	-

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Summary

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