Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Pygm ENSRNOG00000021090

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Description

glycogen phosphorylase, muscle associated [Source:RGD Symbol;Acc:3461]

Location

Primary_assembly 1: 213,119,791-213,134,612 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 261 orthologues, 2 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028636.7	Pygm-201	2899	860aa	ENSRNOP00000028636.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V8V3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000094854.2	Pygm-202	2743	808aa	ENSRNOP00000089298.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9J1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000099163.2	Pygm-204	2712	798aa	ENSRNOP00000081606.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G867	-
ENSRNOT00000097542.2	Pygm-203	2686	832aa	ENSRNOP00000085985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2T3	-

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Summary

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