Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
External references
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ID History
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Gene: Sbsn ENSRNOG00000021015

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Description

suprabasin [Source:RGD Symbol;Acc:1562305]

Gene Synonyms

LOC292793, MGC125085, RGD1562305

Location

Primary_assembly 1: 95,120,927-95,134,220 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 5 transcripts (splice variants), 98 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000133127.1	Sbsn-203	3438	745aa	ENSRNOP00000099167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000028526.9	Sbsn-201	3621	654aa	ENSRNOP00000028526.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FEM5	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000142241.1	Sbsn-205	2733	510aa	ENSRNOP00000110524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000136692.1	Sbsn-204	2652	644aa	ENSRNOP00000099681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000111530.2	Sbsn-202	2263	639aa	ENSRNOP00000084464.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZY59	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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