Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Ms4a4c-ps1 ENSRNOG00000020980

.

Description

membrane-spanning 4-domains, subfamily A, member 4C, pseudo 1 [Source:RGD Symbol;Acc:1590996]

Gene Synonyms

AABR07006278.1, LOC690836

Location

Primary_assembly 1: 217,790,798-217,820,463 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 51 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028483.8	Ms4a4c-ps1-202	795	223aa	ENSRNOP00000028483.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A4D6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000028476.9	Ms4a4c-ps1-201	1525	213aa	ENSRNOP00000028476.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M4I8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.