Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tuft1 ENSRNOG00000020923

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Description

tuftelin 1 [Source:RGD Symbol;Acc:1310373]

Gene Synonyms

LOC365864, MGC188530

Location

Primary_assembly 2: 184,949,437-184,995,383 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 253 orthologues, 8 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000089402.3	Tuft1-203	2878	390aa	ENSRNOP00000074336.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7T4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000103502.2	Tuft1-204	2690	368aa	ENSRNOP00000083514.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZX33	-
ENSRNOT00000079776.3	Tuft1-202	2614	365aa	ENSRNOP00000070926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DEI8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000056436.5	Tuft1-201	2524	335aa	ENSRNOP00000053275.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZKZ5	-

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Summary

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