Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Hdac5 ENSRNOG00000020905

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Description

histone deacetylase 5 [Source:RGD Symbol;Acc:619980]

Location

Primary_assembly 10: 87,652,656-87,694,244 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 5 transcripts (splice variants), 195 orthologues, 11 paralogues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101600.2	Hdac5-202	3985	1114aa	ENSRNOP00000080604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G4R8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000105575.2	Hdac5-203	3891	1090aa	ENSRNOP00000077322.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XW09	-
ENSRNOT00000107360.2	Hdac5-204	3730	1029aa	ENSRNOP00000088847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAJ0	-
ENSRNOT00000168842.1	Hdac5-205	3575	1092aa	ENSRNOP00000107526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000055187.6	Hdac5-201	3568	1093aa	ENSRNOP00000052059.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LM64	-

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Summary

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