Gene: Smarcc1 ENSRNOG00000020804

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:RGD Symbol;Acc:1304850]

Gene Synonyms

LOC301020

Location

GRCr8:CM070398.1

About this gene

This gene has 2 transcripts (splice variants), 232 orthologues, 3 paralogues and is associated with 16 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000115679.2	Smarcc1-202	5672	1102aa	ENSRNOP00000094509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMA8 A6I3D4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000082607.3	Smarcc1-201	3630	1072aa	ENSRNOP00000074957.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K9D6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary