Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Lin7b ENSRNOG00000020746

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Description

lin-7 homolog B, crumbs cell polarity complex component [Source:RGD Symbol;Acc:620730]

Gene Synonyms

MALS-2, MALS2, Veli1a, Veli2, lin-7B

Location

Primary_assembly 1: 104,982,771-104,986,078 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 112 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000165243.1	Lin7b-202	759	207aa	ENSRNOP00000107896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JB15	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000028164.5	Lin7b-201	1659	201aa	ENSRNOP00000028164.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Z252	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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