Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Shisa5 ENSRNOG00000020667

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Description

shisa family member 5 [Source:RGD Symbol;Acc:1359661]

Gene Synonyms

MGC94600

Location

Primary_assembly 8: 118,569,975-118,584,880 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000077236.3	Shisa5-202	1786	245aa	ENSRNOP00000072905.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K447	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000153665.1	Shisa5-205	1745	161aa	ENSRNOP00000106892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I3A4	-
ENSRNOT00000150153.1	Shisa5-204	1699	216aa	ENSRNOP00000108466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000056199.4	Shisa5-201	1519	130aa	ENSRNOP00000053045.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I3A9 Q5XIH2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000143504.1	Shisa5-203	1480	142aa	ENSRNOP00000109797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I3A8	-

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Summary

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