Gene: Col7a1 ENSRNOG00000020579

Description

collagen type VII alpha 1 chain [Source:RGD Symbol;Acc:1311417]

Gene Synonyms

LOC301012

Location

GRCr8:CM070398.1

About this gene

This gene has 3 transcripts (splice variants), 49 orthologues, 36 paralogues and is associated with 28 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000027994.8	Col7a1-201	9312	2944aa	ENSRNOP00000027994.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZE04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000153275.1	Col7a1-203	985	214aa	ENSRNOP00000105792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000028031.6	Col7a1-202	661	110aa	ENSRNOP00000028031.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1YKY4	-

Summary