Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Efna1 ENSRNOG00000020573

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Description

ephrin A1 [Source:RGD Symbol;Acc:620388]

Gene Synonyms

B61, LERK-1

Location

Primary_assembly 2: 176,979,434-176,988,726 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 275 orthologues, 6 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117150.2	Efna1-202	1990	302aa	ENSRNOP00000082577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUD2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000128592.1	Efna1-203	1559	193aa	ENSRNOP00000099118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000143126.1	Efna1-204	1529	192aa	ENSRNOP00000107201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000027920.7	Efna1-201	1429	183aa	ENSRNOP00000027920.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QHH8	-

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Summary

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