Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Pgap6 ENSRNOG00000020374

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Description

post-GPI attachment to proteins 6 [Source:RGD Symbol;Acc:1311395]

Gene Synonyms

M83, Tmem8, Tmem8a

Location

Primary_assembly 10: 15,643,106-15,652,912 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 191 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000027609.7	Pgap6-201	3455	772aa	ENSRNOP00000027609.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HD88 D3ZKI8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000148752.1	Pgap6-204	3506	767aa	ENSRNOP00000107924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110211.2	Pgap6-203	3449	748aa	ENSRNOP00000082896.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVT8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000079826.3	Pgap6-202	3308	723aa	ENSRNOP00000069297.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JV00	-

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Summary

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