Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Clcc1 ENSRNOG00000020360

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Description

chloride channel CLIC-like 1 [Source:RGD Symbol;Acc:708359]

Gene Synonyms

LOC170927, Mclc

Location

Primary_assembly 2: 198,984,495-199,015,014 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 120 orthologues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000051701.6	Clcc1-202	2111	541aa	ENSRNOP00000042185.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAF5 A6HV18	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000027617.7	Clcc1-201	1941	507aa	ENSRNOP00000027617.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HV20 D3ZKI2	-
ENSRNOT00000147497.1	Clcc1-204	1921	492aa	ENSRNOP00000102079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000134976.1	Clcc1-203	1511	395aa	ENSRNOP00000105348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HV24	-

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Summary

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