Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Vps4a ENSRNOG00000020351

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Description

vacuolar protein sorting 4 homolog A [Source:RGD Symbol;Acc:628810]

Location

Primary_assembly 19: 51,833,914-51,872,423 forward strand.

GRCr8:CM070409.1

About this gene

This gene has 2 transcripts (splice variants), 212 orthologues, 9 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000050612.7	Vps4a-201	2592	510aa	ENSRNOP00000046690.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F1Y3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000146477.1	Vps4a-202	1935	485aa	ENSRNOP00000100072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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