Gene: Lsp1 ENSRNOG00000020300

Description

lymphocyte-specific protein 1 [Source:RGD Symbol;Acc:1306133]

Gene Synonyms

LOC361680

Location

Primary_assembly 1: 207,044,159-207,077,893 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 8 transcripts (splice variants), 208 orthologues, 1 paralogue and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117597.2	Lsp1-205	1756	458aa	ENSRNOP00000084830.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000103844.2	Lsp1-204	1797	329aa	ENSRNOP00000081424.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSB6 A6HY52	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000054864.6	Lsp1-201	1794	367aa	ENSRNOP00000051747.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F780	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000119046.2	Lsp1-206	1483	319aa	ENSRNOP00000096511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLM4	-
ENSRNOT00000100448.2	Lsp1-203	1473	328aa	ENSRNOP00000091689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJU8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000094065.2	Lsp1-202	1064	331aa	ENSRNOP00000086060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GDM1 Q4QQV6	-
ENSRNOT00000148081.1	Lsp1-207	1032	323aa	ENSRNOP00000108885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000150787.1	Lsp1-208	1003	327aa	ENSRNOP00000111508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Gene: Lsp1 ENSRNOG00000020300

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Gene: Lsp1 ENSRNOG00000020300

Summary

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