Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Plekhn1 ENSRNOG00000020295

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Description

pleckstrin homology domain containing N1 [Source:RGD Symbol;Acc:1311019]

Gene Synonyms

LOC298694, RGD1311019

Location

Primary_assembly 5: 172,087,055-172,095,374 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 2 transcripts (splice variants), 129 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000038556.6	Plekhn1-201	2801	615aa	ENSRNOP00000031799.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IUW8 D3Z815	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105894.2	Plekhn1-202	3404	613aa	ENSRNOP00000082942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUH3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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