Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ctsd ENSRNOG00000020206

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Description

cathepsin D [Source:RGD Symbol;Acc:621511]

Location

Primary_assembly 1: 206,956,944-206,968,821 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 213 orthologues, 8 paralogues and is associated with 18 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107378.2	Ctsd-202	1989	407aa	ENSRNOP00000093455.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIK0 A0A8I6AKF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000027407.6	Ctsd-201	1876	406aa	ENSRNOP00000027407.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F3R8	-
ENSRNOT00000117470.2	Ctsd-203	1236	374aa	ENSRNOP00000092879.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HY44	-

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Summary

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