Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Supt3h ENSRNOG00000020153

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Description

SPT3 homolog, SAGA and STAGA complex component [Source:RGD Symbol;Acc:1591316]

Gene Synonyms

LOC685697

Location

Primary_assembly 9: 23,376,136-23,704,466 reverse strand.

GRCr8:CM070399.1

About this gene

This gene has 9 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097089.2	Supt3h-202	1460	416aa	ENSRNOP00000076482.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YBB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000164669.1	Supt3h-208	2246	349aa	ENSRNOP00000101356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000124302.1	Supt3h-205	2243	410aa	ENSRNOP00000100017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000111359.2	Supt3h-203	2138	347aa	ENSRNOP00000094629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AS14	-
ENSRNOT00000165960.1	Supt3h-209	2084	357aa	ENSRNOP00000102930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000128939.1	Supt3h-206	2060	349aa	ENSRNOP00000110412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000144163.1	Supt3h-207	2014	400aa	ENSRNOP00000100162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000114932.2	Supt3h-204	1765	317aa	ENSRNOP00000088356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A991 A6JJ07	-
ENSRNOT00000027293.9	Supt3h-201	1488	411aa	ENSRNOP00000027293.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LY08	-

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Summary

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