Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Matr3 ENSRNOG00000019875

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Description

matrin 3 [Source:RGD Symbol;Acc:3052]

Gene Synonyms

P130/MAT3, snhg4

Location

Primary_assembly 18: 27,432,179-27,470,421 forward strand.

GRCr8:CM070408.1

About this gene

This gene has 4 transcripts (splice variants), 144 orthologues, 1 paralogue and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000147139.1	Matr3-204	2891	865aa	ENSRNOP00000110855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000146659.1	Matr3-203	3837	792aa	ENSRNOP00000103016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000026949.7	Matr3-201	3760	845aa	ENSRNOP00000026949.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JSR7 A6J2X6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000141241.1	Matr3-202	3718	831aa	ENSRNOP00000100340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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