Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Phtf1 ENSRNOG00000019785

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Description

putative homeodomain transcription factor 1 [Source:RGD Symbol;Acc:620426]

Gene Synonyms

LOC102555542, Phtf

Location

Primary_assembly 2: 194,161,000-194,219,530 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 6 transcripts (splice variants), 202 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094636.2	Phtf1-202	3205	762aa	ENSRNOP00000084885.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYW2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000102049.2	Phtf1-203	3046	709aa	ENSRNOP00000081809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTV4	-
ENSRNOT00000026863.8	Phtf1-201	2911	743aa	ENSRNOP00000026863.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M8G0	-
ENSRNOT00000139079.1	Phtf1-206	2872	757aa	ENSRNOP00000105769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000113077.2	Phtf1-204	2776	717aa	ENSRNOP00000088577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AB21	-
ENSRNOT00000118366.2	Phtf1-205	2211	736aa	ENSRNOP00000079040.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZM77	-

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Summary

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