Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Arid3b ENSRNOG00000019677

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Description

AT-rich interaction domain 3B [Source:RGD Symbol;Acc:1306335]

Gene Synonyms

LOC367092

Location

Primary_assembly 8: 67,083,802-67,152,245 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 3 transcripts (splice variants), 274 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000068340.5	Arid3b-201	4110	595aa	ENSRNOP00000062477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZGC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000142344.1	Arid3b-203	1785	539aa	ENSRNOP00000111731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000117505.2	Arid3b-202	782	234aa	ENSRNOP00000084154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZX71	-

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Summary

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