Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Syt6 ENSRNOG00000019163

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Description

synaptotagmin 6 [Source:RGD Symbol;Acc:62012]

Gene Synonyms

MGC116356

Location

Primary_assembly 2: 191,093,007-191,149,956 forward strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 4 transcripts (splice variants), 226 orthologues, 31 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114478.1	Syt6-204	10617	517aa	ENSRNOP00000090316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ABK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000094540.1	Syt6-203	2000	437aa	ENSRNOP00000081725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JW68	-
ENSRNOT00000077739.2	Syt6-202	1880	426aa	ENSRNOP00000069764.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JW68 Q62746	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000025953.6	Syt6-201	1706	433aa	ENSRNOP00000025953.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62746-1	-

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Summary

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