Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOC100365810 ENSRNOG00000019106

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Description

40S ribosomal protein S17-like [Source:RGD Symbol;Acc:2318277]

Location

Primary_assembly 1: 135,295,919-135,298,535 reverse strand.

mRatBN7.2:CM026974.1

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110839.1	LOC100365810-203	726	209aa	ENSRNOP00000094318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B017	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000100646.1	LOC100365810-202	466	135aa	ENSRNOP00000096874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P04644	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000025888.8	LOC100365810-201	448	137aa	ENSRNOP00000025888.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHQ8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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