Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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Pathway
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ID History
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Gene: Tjap1 ENSRNOG00000018980

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Description

tight junction associated protein 1 [Source:RGD Symbol;Acc:1308708]

Gene Synonyms

LOC316233, Tjp4

Location

Primary_assembly 9: 22,199,676-22,223,201 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 4 transcripts (splice variants) and 112 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000115530.2	Tjap1-204	2493	553aa	ENSRNOP00000086121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GDP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000025660.7	Tjap1-201	2490	543aa	ENSRNOP00000025660.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JIR8 D3ZU31	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103212.2	Tjap1-203	2231	541aa	ENSRNOP00000076730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y0B5	-
ENSRNOT00000091113.3	Tjap1-202	2152	491aa	ENSRNOP00000071607.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0W5	-

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Summary

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