Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Scart1 ENSRNOG00000018978

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Description

scavenger receptor family member expressed on T-cells 1 [Source:RGD Symbol;Acc:1307378]

Gene Synonyms

Cd163l1, LOC293591, RGD1307378

Location

Primary_assembly 1: 204,450,386-204,461,441 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 80 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000054880.7	Scart1-202	3297	997aa	ENSRNOP00000051764.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HXI0 D3ZR76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000049269.5	Scart1-201	3291	995aa	ENSRNOP00000045146.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HXH9 D4AEN2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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