Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Entr1 ENSRNOG00000018876

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Description

endosome associated trafficking regulator 1 [Source:RGD Symbol;Acc:1305930]

Gene Synonyms

LOC306322, Sdccag3

Location

Primary_assembly 3: 29,599,059-29,605,898 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 193 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000061669.6	Entr1-201	2333	418aa	ENSRNOP00000058381.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LMK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000102669.2	Entr1-203	2242	382aa	ENSRNOP00000096122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AUN1	-
ENSRNOT00000105263.2	Entr1-204	2205	409aa	ENSRNOP00000084886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2U5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000089705.3	Entr1-202	2041	359aa	ENSRNOP00000068774.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTN0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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