Gene: Snapc4 ENSRNOG00000018845

Description

small nuclear RNA activating complex, polypeptide 4 [Source:RGD Symbol;Acc:1309048]

Gene Synonyms

LOC362088

Location

mRatBN7.2:CM026976.1

About this gene

This gene has 2 transcripts (splice variants), 183 orthologues, 8 paralogues and is associated with 14 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000061682.5	Snapc4-201	4110	1345aa	ENSRNOP00000058393.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LYZ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000068110.5	Snapc4-202	4350	1337aa	ENSRNOP00000061702.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A3C9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary