Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rnf40 ENSRNOG00000018840

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Description

ring finger protein 40 [Source:RGD Symbol;Acc:628638]

Gene Synonyms

BRE1-B

Location

Primary_assembly 1: 191,633,034-191,648,421 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues, 1 paralogue and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000025499.4	Rnf40-201	4157	1007aa	ENSRNOP00000025500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UK73	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000112181.2	Rnf40-204	4170	925aa	ENSRNOP00000080878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G786	-
ENSRNOT00000098677.2	Rnf40-203	4007	962aa	ENSRNOP00000094962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLE2	-
ENSRNOT00000097364.2	Rnf40-202	3827	902aa	ENSRNOP00000079727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G5N6	-

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Summary

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