Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cox5a ENSRNOG00000018816

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Description

cytochrome c oxidase subunit 5A [Source:RGD Symbol;Acc:620607]

Location

Primary_assembly 8: 57,922,290-57,933,781 forward strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 2 transcripts (splice variants), 299 orthologues, 1 paralogue and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101188.1	Cox5a-202	908	137aa	ENSRNOP00000097463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GM29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000025525.5	Cox5a-201	1065	134aa	ENSRNOP00000025525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QDJ0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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