Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ccnl2 ENSRNOG00000018691

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Description

cyclin L2 [Source:RGD Symbol;Acc:1309149]

Gene Synonyms

LOC298686

Location

Primary_assembly 5: 166,417,508-166,436,882 forward strand.

mRatBN7.2:CM026978.1

About this gene

This gene has 4 transcripts (splice variants), 146 orthologues, 6 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000025531.7	Ccnl2-201	1660	537aa	ENSRNOP00000025531.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000096422.1	Ccnl2-204	2126	491aa	ENSRNOP00000077305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y5M3	-
ENSRNOT00000089936.2	Ccnl2-203	2117	512aa	ENSRNOP00000068952.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5I0H5-2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000025952.5	Ccnl2-202	1169	200aa	ENSRNOP00000025952.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AY68	-

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Summary

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