Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: C17h6orf62 ENSRNOG00000018456

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Description

similar to human chromosome 6 open reading frame 62 [Source:RGD Symbol;Acc:6491729]

Gene Synonyms

LOC100911664

Location

Primary_assembly 17: 40,684,236-40,704,043 reverse strand.

GRCr8:CM070407.1

About this gene

This gene has 2 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083996.3	C17h6orf62-202	734	229aa	ENSRNOP00000072694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K3M0 Q7TP28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000059564.6	C17h6orf62-201	2084	228aa	ENSRNOP00000056321.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7ELW2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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